oh i'm sorry.
eh local/global alignment, is actually like a matching strings.
for example
user input two strings
1st string: AGTTCAGCA
2nd string: ATCATCA
after some programming using perl language,
the output will become
AGTTCAGCA
A- T -CATCA
the best result.
i have no idea how to program it.
Last edited by lichy; 09-30-2007 at 10:55 PM.
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